1. Vasudevan, S.V. *, and Kumar, A. Antimicrobial peptide ROAD−1 Triggers Phase Change in Local Membrane Environment to Execute its Activity. Journal of Molecular Modeling, 2019,25:281. https://doi.org/10.1007/s00894-019-4163-8
2. Agadi, N., Vasudevan, S., Kumar, A. Structural insight into the mechanism of action of antimicrobial peptide BMAP-28(1-18) and its analogue mutBMAP18. Journal of Structural Biology, 2018, 204(3):435-448.
3. Afzal, A.J., Srour, A., Goil, A., Vasudevan, S., Liu, T., Samudrala, R.,Dogra, N., Kohli, P.,Malakar, A., Lightfoot, D.A. Homo-dimerization and Ligand Binding by the Leucine-rich Repeat Domain at RHG1/RFS2 Causes Resistance To Soybean Pathogens. BMC Plant Biology, 2013, 13:43.
4. Vasudevan S.V., Schulz J., Zhou C. and Cocco M.J. Protein folding at the membrane interface, the structure of Nogo-66 requires interactions with a phosphocholine surface. Proc Natl Acad Sci USA, 2010, 107(15), 6847-51.
5. Vasudevan S., Yuan, J., Osapay, G., Tran, P., Tai, K., Selsted, M. and Cocco, M.J. Synthesis, structure and activities of an oral mucosal alpha-defensin from Rhesus Macaque. Journal of Biological Chemistry, 2008, 283(51),35869-77.
6. Zhang Y., Vasudevan S., Sojitrawala R., Zhao W., Cui C., Fan D.,Newhouse Y., Balestra B., Jerome W.G., Weisgraber K., Li Q. and Wang J. A monomeric biologically active full length human apolipoprotein E. Biochemistry, 2007, 46, 10722-32. (*Authors contributed equally).
7. Pandit, S. A., Vasudevan, S., Chiu, S.W., Mashl, J.R., Jakobsson, E. and Scott, H.L. Sphingomyelin-cholesterol domains in phospholipid membranes: atomistic simulation. Biophysical Journal, 2004, 87, 1092-1100.
8. Chiu, S.W., Vasudevan, S., Jakobsson, E., Mashl, J.R., and Scott, H.L.Structure of sphingomyelin bilayers: a simulation study. Biophysical Journal, 2003, 85, 3624-35.
9. Vasudevan, S.V and Petety V. Balaji. Molecular Dynamics simulations of alpha 2,8 Linked disialoside: Conformational analysis and implications for binding to proteins. Biopolymers, 2003, 63, 168-180.
10. Vasudevan, S.V. and Petety V. Balaji. Comparative analysis of ganglioside conformations by MD simulations: implications for specific recognition by proteins. Journal of Molecular Structure (Theochem), 2002, 583, 215-232.
11. Vasudevan, S.V. and Petety V. Balaji. Conformation, orientation and dynamics of dodecylphosphocholine in micellar aggregate: A molecular dynamics Study. Indian Journal of Biochemistry and Biophysics, 2002, 39, 87-92.
12. Vasudevan, S.V. and Petety V. Balaji. Dynamics of ganglioside headgroup in lipid environment: Molecular Dynamics simulations of GM1 embedded dodecylphosphocholine micelle. Journal of Physical Chemistry B, 2001, 105 (29), 7033-7041.